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hyperspectral_microscopy_image_analysis_using_imagej

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hyperspectral_microscopy_image_analysis_using_imagej [2014/08/12 15:47] stephsamhyperspectral_microscopy_image_analysis_using_imagej [2022/08/26 12:10] (current) – old revision restored (2014/08/12 15:48) cosine
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 Once you have loaded your image stacks for the sample and substrate as well as the single frame of dark current you will perform calculations as follows:  Once you have loaded your image stacks for the sample and substrate as well as the single frame of dark current you will perform calculations as follows: 
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 1. Measure the mean value of the dark current image (Analyze>Measure)  1. Measure the mean value of the dark current image (Analyze>Measure) 
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 2. Subtract the dark current mean value from the sample and substrate stacks (Process>Math>Subtract)  2. Subtract the dark current mean value from the sample and substrate stacks (Process>Math>Subtract) 
-3. Perform image calculation to subtract the substrate image from the sample image (Process>Image Calculation) + 
 +3. Perform image calculation to subtract the substrate image from the sample image (Process>Image Calculation) 
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 4. Perform another image calculation to divide the result of step 3 by the substrate image.  4. Perform another image calculation to divide the result of step 3 by the substrate image. 
  
hyperspectral_microscopy_image_analysis_using_imagej.1407883678.txt.gz · Last modified: 2014/08/12 15:47 by stephsam